Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smad4P97471 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smad4P97471 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.51■□□□□ 0.71
Smad4P97471 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.51■□□□□ 0.71
Smad4P97471 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.51■□□□□ 0.71
Smad4P97471 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.51■□□□□ 0.71
Smad4P97471 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.51■□□□□ 0.71
Smad4P97471 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Smad4P97471 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smad4P97471 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 AA386476-201ENSMUST00000098781 1665 ntBASIC19.5■□□□□ 0.71
Smad4P97471 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.5■□□□□ 0.71
Smad4P97471 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.5■□□□□ 0.71
Smad4P97471 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smad4P97471 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smad4P97471 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.5■□□□□ 0.71
Smad4P97471 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smad4P97471 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Smad4P97471 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smad4P97471 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Smad4P97471 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smad4P97471 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smad4P97471 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smad4P97471 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Smad4P97471 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smad4P97471 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smad4P97471 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Smad4P97471 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smad4P97471 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smad4P97471 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smad4P97471 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smad4P97471 Gm44549-201ENSMUST00000208351 577 ntBASIC19.46■□□□□ 0.71
Smad4P97471 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smad4P97471 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
Smad4P97471 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smad4P97471 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.45■□□□□ 0.7
Smad4P97471 Gm6433-201ENSMUST00000118634 875 ntBASIC19.45■□□□□ 0.7
Smad4P97471 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.45■□□□□ 0.7
Smad4P97471 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.45■□□□□ 0.7
Smad4P97471 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smad4P97471 Gm10231-201ENSMUST00000181584 441 ntBASIC19.45■□□□□ 0.7
Smad4P97471 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smad4P97471 Gm10175-202ENSMUST00000208752 441 ntBASIC19.45■□□□□ 0.7
Smad4P97471 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.45■□□□□ 0.7
Smad4P97471 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smad4P97471 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smad4P97471 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smad4P97471 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smad4P97471 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.45■□□□□ 0.7
Smad4P97471 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.44■□□□□ 0.7
Smad4P97471 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.44■□□□□ 0.7
Smad4P97471 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smad4P97471 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Smad4P97471 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smad4P97471 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smad4P97471 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smad4P97471 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.43■□□□□ 0.7
Smad4P97471 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smad4P97471 Gm2399-201ENSMUST00000104944 225 ntBASIC19.43■□□□□ 0.7
Smad4P97471 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.43■□□□□ 0.7
Smad4P97471 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms