Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SgcdP82347 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SgcdP82347 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.75■□□□□ 0.43
SgcdP82347 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.75■□□□□ 0.43
SgcdP82347 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SgcdP82347 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SgcdP82347 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
SgcdP82347 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SgcdP82347 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SgcdP82347 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.74■□□□□ 0.43
SgcdP82347 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SgcdP82347 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SgcdP82347 Grk6-206ENSMUST00000224995 2971 ntBASIC17.73■□□□□ 0.43
SgcdP82347 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SgcdP82347 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SgcdP82347 Gm21956-201ENSMUST00000179946 522 ntBASIC17.73■□□□□ 0.43
SgcdP82347 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.73■□□□□ 0.43
SgcdP82347 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SgcdP82347 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
SgcdP82347 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SgcdP82347 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.72■□□□□ 0.43
SgcdP82347 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.72■□□□□ 0.43
SgcdP82347 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SgcdP82347 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcdP82347 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.72■□□□□ 0.43
SgcdP82347 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SgcdP82347 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.72■□□□□ 0.43
SgcdP82347 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.71■□□□□ 0.43
SgcdP82347 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.71■□□□□ 0.43
SgcdP82347 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.71■□□□□ 0.43
SgcdP82347 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SgcdP82347 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcdP82347 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.7■□□□□ 0.42
SgcdP82347 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.7■□□□□ 0.42
SgcdP82347 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcdP82347 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SgcdP82347 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SgcdP82347 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SgcdP82347 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcdP82347 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.68■□□□□ 0.42
SgcdP82347 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SgcdP82347 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms