Protein–RNA interactions for Protein: P61264

Stx1b, Syntaxin-1B, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1bP61264 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Etf1-202ENSMUST00000180351 108 ntBASIC18.84■□□□□ 0.61
Stx1bP61264 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Stx1bP61264 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.83■□□□□ 0.61
Stx1bP61264 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Stx1bP61264 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Stx1bP61264 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.83■□□□□ 0.61
Stx1bP61264 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Stx1bP61264 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1bP61264 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Stx1bP61264 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1bP61264 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1bP61264 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1bP61264 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Stx1bP61264 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1bP61264 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Stx1bP61264 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.83■□□□□ 0.6
Stx1bP61264 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1bP61264 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Stx1bP61264 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1bP61264 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1bP61264 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.82■□□□□ 0.6
Stx1bP61264 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1bP61264 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Stx1bP61264 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1bP61264 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Stx1bP61264 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.81■□□□□ 0.6
Stx1bP61264 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.81■□□□□ 0.6
Stx1bP61264 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Stx1bP61264 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1bP61264 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.81■□□□□ 0.6
Stx1bP61264 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1bP61264 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Stx1bP61264 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Stx1bP61264 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Stx1bP61264 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1bP61264 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Stx1bP61264 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.8■□□□□ 0.6
Stx1bP61264 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Stx1bP61264 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.8■□□□□ 0.6
Stx1bP61264 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1bP61264 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.8■□□□□ 0.6
Stx1bP61264 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Stx1bP61264 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Stx1bP61264 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Stx1bP61264 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.79■□□□□ 0.6
Stx1bP61264 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.79■□□□□ 0.6
Stx1bP61264 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Stx1bP61264 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Stx1bP61264 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.78■□□□□ 0.6
Stx1bP61264 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.78■□□□□ 0.6
Stx1bP61264 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Stx1bP61264 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Stx1bP61264 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Stx1bP61264 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Stx1bP61264 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.77■□□□□ 0.6
Stx1bP61264 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.77■□□□□ 0.6
Stx1bP61264 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Stx1bP61264 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Stx1bP61264 AA386476-201ENSMUST00000098781 1665 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms