Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne2P59108 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cpne2P59108 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpne2P59108 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne2P59108 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne2P59108 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.21■□□□□ 0.19
Cpne2P59108 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne2P59108 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne2P59108 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cpne2P59108 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cpne2P59108 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cpne2P59108 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.2■□□□□ 0.18
Cpne2P59108 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cpne2P59108 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cpne2P59108 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.2■□□□□ 0.18
Cpne2P59108 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cpne2P59108 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.2■□□□□ 0.18
Cpne2P59108 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.2■□□□□ 0.18
Cpne2P59108 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cpne2P59108 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cpne2P59108 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.19■□□□□ 0.18
Cpne2P59108 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
Cpne2P59108 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Grk6-206ENSMUST00000224995 2971 ntBASIC16.19■□□□□ 0.18
Cpne2P59108 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.19■□□□□ 0.18
Cpne2P59108 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.19■□□□□ 0.18
Cpne2P59108 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.19■□□□□ 0.18
Cpne2P59108 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.19■□□□□ 0.18
Cpne2P59108 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.19■□□□□ 0.18
Cpne2P59108 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.19■□□□□ 0.18
Cpne2P59108 Gm40881-201ENSMUST00000223397 166 ntBASIC16.19■□□□□ 0.18
Cpne2P59108 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Cpne2P59108 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cpne2P59108 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.18■□□□□ 0.18
Cpne2P59108 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Cpne2P59108 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cpne2P59108 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cpne2P59108 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.18■□□□□ 0.18
Cpne2P59108 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.18■□□□□ 0.18
Cpne2P59108 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.18■□□□□ 0.18
Cpne2P59108 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cpne2P59108 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cpne2P59108 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne2P59108 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.17■□□□□ 0.18
Cpne2P59108 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne2P59108 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne2P59108 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne2P59108 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne2P59108 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cpne2P59108 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpne2P59108 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpne2P59108 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.17■□□□□ 0.18
Cpne2P59108 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpne2P59108 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cpne2P59108 Gm15820-201ENSMUST00000201566 728 ntBASIC16.16■□□□□ 0.18
Cpne2P59108 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cpne2P59108 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.16■□□□□ 0.18
Cpne2P59108 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cpne2P59108 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cpne2P59108 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.16■□□□□ 0.18
Cpne2P59108 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms