Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.02■■□□□ 1.44
CLCN3P51790 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCN3P51790 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.02■■□□□ 1.44
CLCN3P51790 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.02■■□□□ 1.44
CLCN3P51790 AL137784.2-201ENST00000607332 1000 ntBASIC24.02■■□□□ 1.44
CLCN3P51790 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.02■■□□□ 1.44
CLCN3P51790 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLCN3P51790 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CLCN3P51790 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN3P51790 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN3P51790 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.01■■□□□ 1.43
CLCN3P51790 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CLCN3P51790 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN3P51790 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.01■■□□□ 1.43
CLCN3P51790 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN3P51790 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.01■■□□□ 1.43
CLCN3P51790 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN3P51790 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCN3P51790 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN3P51790 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN3P51790 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN3P51790 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24■■□□□ 1.43
CLCN3P51790 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24■■□□□ 1.43
CLCN3P51790 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CLCN3P51790 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24■■□□□ 1.43
CLCN3P51790 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN3P51790 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24■■□□□ 1.43
CLCN3P51790 NFE2L3P1-201ENST00000588207 1959 ntBASIC24■■□□□ 1.43
CLCN3P51790 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24■■□□□ 1.43
CLCN3P51790 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN3P51790 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN3P51790 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CLCN3P51790 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.99■■□□□ 1.43
CLCN3P51790 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.99■■□□□ 1.43
CLCN3P51790 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.99■■□□□ 1.43
CLCN3P51790 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.99■■□□□ 1.43
CLCN3P51790 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN3P51790 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN3P51790 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN3P51790 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCN3P51790 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN3P51790 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CLCN3P51790 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.98■■□□□ 1.43
CLCN3P51790 AC004911.1-201ENST00000416316 871 ntBASIC23.98■■□□□ 1.43
CLCN3P51790 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.98■■□□□ 1.43
CLCN3P51790 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
CLCN3P51790 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN3P51790 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCN3P51790 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN3P51790 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN3P51790 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CLCN3P51790 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN3P51790 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CLCN3P51790 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.97■■□□□ 1.43
CLCN3P51790 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.97■■□□□ 1.43
CLCN3P51790 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.97■■□□□ 1.43
CLCN3P51790 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.97■■□□□ 1.43
CLCN3P51790 AC004854.2-201ENST00000608450 1441 ntBASIC23.97■■□□□ 1.43
CLCN3P51790 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN3P51790 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN3P51790 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN3P51790 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.96■■□□□ 1.43
CLCN3P51790 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.96■■□□□ 1.43
CLCN3P51790 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.96■■□□□ 1.43
CLCN3P51790 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.96■■□□□ 1.43
CLCN3P51790 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.96■■□□□ 1.43
CLCN3P51790 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN3P51790 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CLCN3P51790 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCN3P51790 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CLCN3P51790 AP004607.4-201ENST00000530158 1459 ntBASIC23.95■■□□□ 1.42
CLCN3P51790 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CLCN3P51790 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.95■■□□□ 1.42
CLCN3P51790 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
CLCN3P51790 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
CLCN3P51790 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.95■■□□□ 1.42
CLCN3P51790 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CLCN3P51790 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.95■■□□□ 1.42
CLCN3P51790 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.95■■□□□ 1.42
CLCN3P51790 AC079089.2-201ENST00000531211 1277 ntBASIC23.95■■□□□ 1.42
CLCN3P51790 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
CLCN3P51790 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.95■■□□□ 1.42
CLCN3P51790 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
CLCN3P51790 RARRES2P11-201ENST00000635158 484 ntBASIC23.95■■□□□ 1.42
CLCN3P51790 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms