Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GdnfP48540 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GdnfP48540 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
GdnfP48540 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.79■□□□□ 0.28
GdnfP48540 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.79■□□□□ 0.28
GdnfP48540 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GdnfP48540 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
GdnfP48540 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GdnfP48540 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.78■□□□□ 0.28
GdnfP48540 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GdnfP48540 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.78■□□□□ 0.28
GdnfP48540 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.78■□□□□ 0.28
GdnfP48540 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GdnfP48540 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GdnfP48540 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GdnfP48540 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GdnfP48540 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GdnfP48540 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
GdnfP48540 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GdnfP48540 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GdnfP48540 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
GdnfP48540 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GdnfP48540 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.76■□□□□ 0.27
GdnfP48540 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.76■□□□□ 0.27
GdnfP48540 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.76■□□□□ 0.27
GdnfP48540 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GdnfP48540 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GdnfP48540 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.76■□□□□ 0.27
GdnfP48540 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.75■□□□□ 0.27
GdnfP48540 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
GdnfP48540 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GdnfP48540 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GdnfP48540 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GdnfP48540 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GdnfP48540 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.74■□□□□ 0.27
GdnfP48540 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GdnfP48540 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.74■□□□□ 0.27
GdnfP48540 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.74■□□□□ 0.27
GdnfP48540 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.74■□□□□ 0.27
GdnfP48540 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GdnfP48540 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GdnfP48540 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms