Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cd9P40240 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Cd9P40240 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.08■□□□□ 0.64
Cd9P40240 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.08■□□□□ 0.64
Cd9P40240 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
Cd9P40240 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cd9P40240 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Cd9P40240 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cd9P40240 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cd9P40240 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.07■□□□□ 0.64
Cd9P40240 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cd9P40240 Gm26833-201ENSMUST00000180899 440 ntBASIC19.07■□□□□ 0.64
Cd9P40240 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cd9P40240 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Cd9P40240 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cd9P40240 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Cd9P40240 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.06■□□□□ 0.64
Cd9P40240 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cd9P40240 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Cd9P40240 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cd9P40240 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.06■□□□□ 0.64
Cd9P40240 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cd9P40240 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Cd9P40240 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cd9P40240 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cd9P40240 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.05■□□□□ 0.64
Cd9P40240 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Cd9P40240 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Cd9P40240 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cd9P40240 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.04■□□□□ 0.64
Cd9P40240 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Cd9P40240 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.04■□□□□ 0.64
Cd9P40240 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cd9P40240 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Cd9P40240 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cd9P40240 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cd9P40240 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cd9P40240 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
Cd9P40240 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cd9P40240 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cd9P40240 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cd9P40240 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd9P40240 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cd9P40240 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cd9P40240 Gm43017-201ENSMUST00000198296 752 ntBASIC19.02■□□□□ 0.64
Cd9P40240 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd9P40240 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd9P40240 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cd9P40240 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Cd9P40240 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms