Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
Thbs1P35441 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thbs1P35441 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Thbs1P35441 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thbs1P35441 Gm12251-201ENSMUST00000117893 792 ntBASIC17.8■□□□□ 0.44
Thbs1P35441 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.8■□□□□ 0.44
Thbs1P35441 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
Thbs1P35441 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Thbs1P35441 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Thbs1P35441 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thbs1P35441 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Thbs1P35441 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Thbs1P35441 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Thbs1P35441 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.79■□□□□ 0.44
Thbs1P35441 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Thbs1P35441 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Thbs1P35441 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Thbs1P35441 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.79■□□□□ 0.44
Thbs1P35441 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thbs1P35441 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.78■□□□□ 0.44
Thbs1P35441 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thbs1P35441 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.78■□□□□ 0.44
Thbs1P35441 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thbs1P35441 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Thbs1P35441 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Thbs1P35441 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Thbs1P35441 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Thbs1P35441 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thbs1P35441 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thbs1P35441 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Thbs1P35441 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thbs1P35441 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Thbs1P35441 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Thbs1P35441 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Thbs1P35441 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Thbs1P35441 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Thbs1P35441 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.76■□□□□ 0.43
Thbs1P35441 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Thbs1P35441 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.76■□□□□ 0.43
Thbs1P35441 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Thbs1P35441 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Thbs1P35441 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Gm45417-201ENSMUST00000209533 758 ntBASIC17.75■□□□□ 0.43
Thbs1P35441 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Thbs1P35441 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.75■□□□□ 0.43
Thbs1P35441 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
Thbs1P35441 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Thbs1P35441 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.74■□□□□ 0.43
Thbs1P35441 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.74■□□□□ 0.43
Thbs1P35441 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Thbs1P35441 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.74■□□□□ 0.43
Thbs1P35441 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Thbs1P35441 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Thbs1P35441 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Thbs1P35441 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.73■□□□□ 0.43
Thbs1P35441 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Mir7075-201ENSMUST00000184187 82 ntBASIC17.73■□□□□ 0.43
Thbs1P35441 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.73■□□□□ 0.43
Thbs1P35441 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Thbs1P35441 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Thbs1P35441 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Thbs1P35441 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Thbs1P35441 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms