Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RxrbP28704 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RxrbP28704 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RxrbP28704 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RxrbP28704 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RxrbP28704 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RxrbP28704 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RxrbP28704 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RxrbP28704 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.42■□□□□ 0.7
RxrbP28704 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RxrbP28704 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.42■□□□□ 0.7
RxrbP28704 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RxrbP28704 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.41■□□□□ 0.7
RxrbP28704 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RxrbP28704 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RxrbP28704 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.4■□□□□ 0.7
RxrbP28704 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RxrbP28704 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RxrbP28704 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RxrbP28704 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RxrbP28704 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.39■□□□□ 0.69
RxrbP28704 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RxrbP28704 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RxrbP28704 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.38■□□□□ 0.69
RxrbP28704 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RxrbP28704 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
RxrbP28704 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RxrbP28704 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RxrbP28704 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RxrbP28704 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.37■□□□□ 0.69
RxrbP28704 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.37■□□□□ 0.69
RxrbP28704 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RxrbP28704 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms