Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Col8a2P25318 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col8a2P25318 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Col8a2P25318 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col8a2P25318 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.16■□□□□ 0.18
Col8a2P25318 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.16■□□□□ 0.18
Col8a2P25318 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Gm38205-201ENSMUST00000192243 258 ntBASIC16.16■□□□□ 0.18
Col8a2P25318 Gm42778-201ENSMUST00000199644 553 ntBASIC16.16■□□□□ 0.18
Col8a2P25318 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.16■□□□□ 0.18
Col8a2P25318 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.16■□□□□ 0.18
Col8a2P25318 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Col8a2P25318 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col8a2P25318 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col8a2P25318 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col8a2P25318 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col8a2P25318 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.15■□□□□ 0.18
Col8a2P25318 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.15■□□□□ 0.18
Col8a2P25318 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col8a2P25318 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Col8a2P25318 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.14■□□□□ 0.17
Col8a2P25318 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 AV356131-201ENSMUST00000206201 750 ntBASIC16.14■□□□□ 0.17
Col8a2P25318 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col8a2P25318 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col8a2P25318 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col8a2P25318 Gm18671-201ENSMUST00000214826 683 ntBASIC16.13■□□□□ 0.17
Col8a2P25318 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col8a2P25318 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Gm27405-201ENSMUST00000184201 112 ntBASIC16.12■□□□□ 0.17
Col8a2P25318 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.12■□□□□ 0.17
Col8a2P25318 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Col8a2P25318 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col8a2P25318 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.11■□□□□ 0.17
Col8a2P25318 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Gm13234-201ENSMUST00000120010 747 ntBASIC16.11■□□□□ 0.17
Col8a2P25318 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.11■□□□□ 0.17
Col8a2P25318 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col8a2P25318 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col8a2P25318 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col8a2P25318 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.1■□□□□ 0.17
Col8a2P25318 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Gm37179-201ENSMUST00000194862 823 ntBASIC16.1■□□□□ 0.17
Col8a2P25318 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Col8a2P25318 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Col8a2P25318 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.1■□□□□ 0.17
Col8a2P25318 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col8a2P25318 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms