Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC12.19□□□□□ -0.46
P06320 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC12.19□□□□□ -0.46
P06320 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
P06320 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.19□□□□□ -0.46
P06320 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
P06320 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P06320 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC12.18□□□□□ -0.46
P06320 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.18□□□□□ -0.46
P06320 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
P06320 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
P06320 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC12.18□□□□□ -0.46
P06320 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
P06320 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
P06320 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Rarb-207ENSMUST00000225921 2756 ntBASIC12.17□□□□□ -0.46
P06320 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.17□□□□□ -0.46
P06320 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
P06320 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
P06320 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
P06320 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.16□□□□□ -0.46
P06320 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
P06320 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
P06320 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
P06320 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
P06320 AC166356.1-201ENSMUST00000228236 1426 ntBASIC12.16□□□□□ -0.46
P06320 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.16□□□□□ -0.46
P06320 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06320 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P06320 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.15□□□□□ -0.46
P06320 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P06320 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Gm27502-201ENSMUST00000183495 199 ntBASIC12.15□□□□□ -0.46
P06320 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC12.15□□□□□ -0.46
P06320 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06320 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
P06320 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06320 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06320 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms