Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
P04945 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Gm27454-201ENSMUST00000185090 204 ntBASIC16.55■□□□□ 0.24
P04945 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P04945 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
P04945 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.54■□□□□ 0.24
P04945 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.54■□□□□ 0.24
P04945 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04945 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04945 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04945 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04945 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
P04945 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04945 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
P04945 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.52■□□□□ 0.24
P04945 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04945 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
P04945 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.52■□□□□ 0.24
P04945 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
P04945 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04945 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
P04945 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
P04945 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Gm8493-201ENSMUST00000196881 489 ntBASIC16.51■□□□□ 0.23
P04945 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.51■□□□□ 0.23
P04945 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P04945 Gm6139-201ENSMUST00000079261 882 ntBASIC16.51■□□□□ 0.23
P04945 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
P04945 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
P04945 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.5■□□□□ 0.23
P04945 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.5■□□□□ 0.23
P04945 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
P04945 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.49■□□□□ 0.23
P04945 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04945 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04945 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04945 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms