Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.94■□□□□ 0.78
Syn1O88935 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Syn1O88935 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syn1O88935 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syn1O88935 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syn1O88935 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Syn1O88935 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.93■□□□□ 0.78
Syn1O88935 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Syn1O88935 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.92■□□□□ 0.78
Syn1O88935 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.92■□□□□ 0.78
Syn1O88935 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 Gm9987-201ENSMUST00000069768 567 ntBASIC19.92■□□□□ 0.78
Syn1O88935 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Syn1O88935 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Syn1O88935 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syn1O88935 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Syn1O88935 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Syn1O88935 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.91■□□□□ 0.78
Syn1O88935 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Syn1O88935 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Syn1O88935 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Syn1O88935 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Syn1O88935 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.9■□□□□ 0.78
Syn1O88935 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Gm37055-201ENSMUST00000191866 133 ntBASIC19.9■□□□□ 0.78
Syn1O88935 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Syn1O88935 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.89■□□□□ 0.77
Syn1O88935 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Syn1O88935 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.89■□□□□ 0.77
Syn1O88935 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.89■□□□□ 0.77
Syn1O88935 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Syn1O88935 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Syn1O88935 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Syn1O88935 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Syn1O88935 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.88■□□□□ 0.77
Syn1O88935 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Syn1O88935 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.87■□□□□ 0.77
Syn1O88935 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Syn1O88935 Gm10819-201ENSMUST00000099988 561 ntBASIC19.87■□□□□ 0.77
Syn1O88935 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Syn1O88935 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syn1O88935 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syn1O88935 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Syn1O88935 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Syn1O88935 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.86■□□□□ 0.77
Syn1O88935 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Syn1O88935 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.86■□□□□ 0.77
Syn1O88935 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Syn1O88935 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Syn1O88935 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.85■□□□□ 0.77
Syn1O88935 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Syn1O88935 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.85■□□□□ 0.77
Syn1O88935 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Syn1O88935 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.84■□□□□ 0.77
Syn1O88935 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Syn1O88935 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Syn1O88935 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms