Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.74■□□□□ 0.43
Capns1O88456 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Capns1O88456 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Capns1O88456 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capns1O88456 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capns1O88456 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Capns1O88456 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.73■□□□□ 0.43
Capns1O88456 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.73■□□□□ 0.43
Capns1O88456 Gm10399-202ENSMUST00000202768 748 ntBASIC17.73■□□□□ 0.43
Capns1O88456 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Capns1O88456 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capns1O88456 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Capns1O88456 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.72■□□□□ 0.43
Capns1O88456 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Capns1O88456 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Capns1O88456 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.71■□□□□ 0.43
Capns1O88456 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.71■□□□□ 0.43
Capns1O88456 Gm8495-201ENSMUST00000188740 694 ntBASIC17.71■□□□□ 0.43
Capns1O88456 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Capns1O88456 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Capns1O88456 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Capns1O88456 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Capns1O88456 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.7■□□□□ 0.42
Capns1O88456 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
Capns1O88456 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Gm7143-201ENSMUST00000222811 859 ntBASIC17.7■□□□□ 0.42
Capns1O88456 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Capns1O88456 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Capns1O88456 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.69■□□□□ 0.42
Capns1O88456 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.69■□□□□ 0.42
Capns1O88456 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Capns1O88456 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Capns1O88456 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Capns1O88456 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Capns1O88456 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.68■□□□□ 0.42
Capns1O88456 Golgb1-201ENSMUST00000023534 498 ntBASIC17.68■□□□□ 0.42
Capns1O88456 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Capns1O88456 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.67■□□□□ 0.42
Capns1O88456 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Capns1O88456 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Capns1O88456 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Capns1O88456 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Capns1O88456 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Capns1O88456 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.66■□□□□ 0.42
Capns1O88456 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capns1O88456 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capns1O88456 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.66■□□□□ 0.42
Capns1O88456 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Capns1O88456 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.66■□□□□ 0.42
Capns1O88456 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.66■□□□□ 0.42
Capns1O88456 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Capns1O88456 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capns1O88456 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Capns1O88456 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms