Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Per2O54943 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.06■□□□□ 0.8
Per2O54943 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.06■□□□□ 0.8
Per2O54943 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Per2O54943 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Per2O54943 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.06■□□□□ 0.8
Per2O54943 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Per2O54943 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Mir7075-201ENSMUST00000184187 82 ntBASIC20.05■□□□□ 0.8
Per2O54943 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Per2O54943 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.05■□□□□ 0.8
Per2O54943 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Per2O54943 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Per2O54943 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.04■□□□□ 0.8
Per2O54943 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.04■□□□□ 0.8
Per2O54943 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Per2O54943 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Per2O54943 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Per2O54943 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.03■□□□□ 0.8
Per2O54943 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Per2O54943 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Per2O54943 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Per2O54943 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Per2O54943 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.02■□□□□ 0.8
Per2O54943 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Per2O54943 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.02■□□□□ 0.8
Per2O54943 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Per2O54943 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Per2O54943 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Per2O54943 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Per2O54943 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.02■□□□□ 0.79
Per2O54943 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Per2O54943 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.01■□□□□ 0.79
Per2O54943 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Per2O54943 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.01■□□□□ 0.79
Per2O54943 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.01■□□□□ 0.79
Per2O54943 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.01■□□□□ 0.79
Per2O54943 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Per2O54943 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Per2O54943 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Per2O54943 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20■□□□□ 0.79
Per2O54943 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Gm27454-201ENSMUST00000185090 204 ntBASIC20■□□□□ 0.79
Per2O54943 Wdr70-203ENSMUST00000227371 1130 ntBASIC20■□□□□ 0.79
Per2O54943 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Per2O54943 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Per2O54943 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Per2O54943 Gm8493-201ENSMUST00000196881 489 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms