Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm3139J3QK78 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Gm3139J3QK78 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm3139J3QK78 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm3139J3QK78 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3139J3QK78 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm3139J3QK78 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3139J3QK78 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gm3139J3QK78 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3139J3QK78 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3139J3QK78 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.24■□□□□ 0.67
Gm3139J3QK78 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm3139J3QK78 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3139J3QK78 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3139J3QK78 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3139J3QK78 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3139J3QK78 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Gm3139J3QK78 Gm27405-201ENSMUST00000184201 112 ntBASIC19.23■□□□□ 0.67
Gm3139J3QK78 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3139J3QK78 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.23■□□□□ 0.67
Gm3139J3QK78 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm3139J3QK78 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.23■□□□□ 0.67
Gm3139J3QK78 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Gm7291-201ENSMUST00000199147 382 ntBASIC19.22■□□□□ 0.67
Gm3139J3QK78 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm3139J3QK78 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.21■□□□□ 0.67
Gm3139J3QK78 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3139J3QK78 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Gm38205-201ENSMUST00000192243 258 ntBASIC19.21■□□□□ 0.67
Gm3139J3QK78 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Gm3139J3QK78 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm3139J3QK78 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.2■□□□□ 0.66
Gm3139J3QK78 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Gm3139J3QK78 Gm7860-201ENSMUST00000121190 879 ntBASIC19.19■□□□□ 0.66
Gm3139J3QK78 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm3139J3QK78 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3139J3QK78 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm3139J3QK78 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Gm3139J3QK78 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Gm3139J3QK78 Gm13146-201ENSMUST00000118508 780 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms