Protein–RNA interactions for Protein: F6U8B9

Gm17555, Predicted gene, 17555, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17555F6U8B9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Gm12922-201ENSMUST00000120626 809 ntBASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm17555F6U8B9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm17555F6U8B9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.72■□□□□ 0.43
Gm17555F6U8B9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gm17555F6U8B9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm17555F6U8B9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17555F6U8B9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17555F6U8B9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17555F6U8B9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm17555F6U8B9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17555F6U8B9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17555F6U8B9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms