Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nkx6-2D3Z4R4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nkx6-2D3Z4R4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.68■□□□□ 0.1
Nkx6-2D3Z4R4 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Nkx6-2D3Z4R4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.66■□□□□ 0.1
Nkx6-2D3Z4R4 BC021767-201ENSMUST00000126387 1716 ntBASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Nkx6-2D3Z4R4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-2D3Z4R4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Nkx6-2D3Z4R4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms