Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Hfm1D3Z4R1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Hfm1D3Z4R1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
Hfm1D3Z4R1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Hfm1D3Z4R1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Hfm1D3Z4R1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Hfm1D3Z4R1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Hfm1D3Z4R1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Hfm1D3Z4R1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Hfm1D3Z4R1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Hfm1D3Z4R1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC27.47■■□□□ 1.99
Hfm1D3Z4R1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hfm1D3Z4R1 Dmtn-209ENSMUST00000228295 2572 ntBASIC27.45■■□□□ 1.99
Hfm1D3Z4R1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Hfm1D3Z4R1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.99
Hfm1D3Z4R1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Hfm1D3Z4R1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC27.45■■□□□ 1.98
Hfm1D3Z4R1 Gm10698-201ENSMUST00000182663 604 ntBASIC27.45■■□□□ 1.98
Hfm1D3Z4R1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Hfm1D3Z4R1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC27.45■■□□□ 1.98
Hfm1D3Z4R1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Hfm1D3Z4R1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Hfm1D3Z4R1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Hfm1D3Z4R1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Hfm1D3Z4R1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
Hfm1D3Z4R1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 AL672049.1-201ENSMUST00000197943 91 ntBASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
Hfm1D3Z4R1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 AC153881.1-201ENSMUST00000214448 284 ntBASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Gm6802-201ENSMUST00000167843 1983 ntBASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Gm32051-202ENSMUST00000197905 2385 ntBASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Gm11249-201ENSMUST00000117071 859 ntBASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Hfm1D3Z4R1 Gm21596-201ENSMUST00000178049 1316 ntBASIC27.4■■□□□ 1.98
Hfm1D3Z4R1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hfm1D3Z4R1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC27.4■■□□□ 1.98
Hfm1D3Z4R1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC27.4■■□□□ 1.98
Hfm1D3Z4R1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC27.4■■□□□ 1.98
Hfm1D3Z4R1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Hfm1D3Z4R1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Hfm1D3Z4R1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Hfm1D3Z4R1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
Hfm1D3Z4R1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Hfm1D3Z4R1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Hfm1D3Z4R1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Hfm1D3Z4R1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 AC154649.1-201ENSMUST00000227392 384 ntBASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hfm1D3Z4R1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Hfm1D3Z4R1 Gm15565-201ENSMUST00000118890 427 ntBASIC27.37■■□□□ 1.97
Hfm1D3Z4R1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Hfm1D3Z4R1 Gm9484-201ENSMUST00000195892 1159 ntBASIC27.37■■□□□ 1.97
Hfm1D3Z4R1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC27.37■■□□□ 1.97
Hfm1D3Z4R1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Hfm1D3Z4R1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
Hfm1D3Z4R1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC27.36■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms