Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Gm15546-201ENSMUST00000122095 826 ntBASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm11127A7VMS2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.02■□□□□ 0.31
Gm11127A7VMS2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm11127A7VMS2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm11127A7VMS2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm11127A7VMS2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm11127A7VMS2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17■□□□□ 0.31
Gm11127A7VMS2 Gm7143-201ENSMUST00000222811 859 ntBASIC17■□□□□ 0.31
Gm11127A7VMS2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm11127A7VMS2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm11127A7VMS2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gm11127A7VMS2 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Etf1-202ENSMUST00000180351 108 ntBASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Gm7417-201ENSMUST00000192950 473 ntBASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gm11127A7VMS2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gm11127A7VMS2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms