Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Tubb1A2AQ07 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Tubb1A2AQ07 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb1A2AQ07 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb1A2AQ07 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb1A2AQ07 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb1A2AQ07 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tubb1A2AQ07 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Gm13241-201ENSMUST00000094493 780 ntBASIC19.77■□□□□ 0.76
Tubb1A2AQ07 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tubb1A2AQ07 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.76■□□□□ 0.75
Tubb1A2AQ07 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tubb1A2AQ07 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tubb1A2AQ07 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tubb1A2AQ07 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tubb1A2AQ07 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tubb1A2AQ07 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms