Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-5A0A140T8M6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-5A0A140T8M6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-5A0A140T8M6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-5A0A140T8M6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Mir6236-201ENSMUST00000184437 123 ntBASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-5A0A140T8M6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Gm15043-201ENSMUST00000118843 1543 ntBASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-5A0A140T8M6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Igkv3-5A0A140T8M6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC12.15□□□□□ -0.47
Igkv3-5A0A140T8M6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Etf1-202ENSMUST00000180351 108 ntBASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-5A0A140T8M6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.13□□□□□ -0.47
Igkv3-5A0A140T8M6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms