Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.89■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 BC021767-201ENSMUST00000126387 1716 ntBASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.85■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav15d-2-dv6d-2A0A0G2JGQ7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms