Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Gm45444-201ENSMUST00000211394 898 ntBASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.53□□□□□ -0.08
Trav3n-3A0A0G2JEM0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Fst-202ENSMUST00000223640 2612 ntBASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav3n-3A0A0G2JEM0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav3n-3A0A0G2JEM0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms