Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ighv3-3A0A0A6YWL2 BC021767-201ENSMUST00000126387 1716 ntBASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Serp2-204ENSMUST00000228055 705 ntBASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gm37352-201ENSMUST00000193908 2181 ntBASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ighv3-3A0A0A6YWL2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Gm9847-201ENSMUST00000052528 599 ntBASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Gm13241-201ENSMUST00000094493 780 ntBASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ighv3-3A0A0A6YWL2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.07□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.07□□□□□ -0.16
Ighv3-3A0A0A6YWL2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms