Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28557A0A087WQQ0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28557A0A087WQQ0 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.33■□□□□ 0.37
Gm28557A0A087WQQ0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm28557A0A087WQQ0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm28557A0A087WQQ0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm28557A0A087WQQ0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm28557A0A087WQQ0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm28557A0A087WQQ0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm28557A0A087WQQ0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm28557A0A087WQQ0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28557A0A087WQQ0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28557A0A087WQQ0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.27■□□□□ 0.35
Gm28557A0A087WQQ0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28557A0A087WQQ0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm28557A0A087WQQ0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm28557A0A087WQQ0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms