Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-4A0A075B6B4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-4A0A075B6B4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6-4A0A075B6B4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Trav6-4A0A075B6B4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-4A0A075B6B4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-4A0A075B6B4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Gm40848-201ENSMUST00000221998 324 ntBASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trav6-4A0A075B6B4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-4A0A075B6B4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-4A0A075B6B4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms