Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav4-4-dv10A0A075B651 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav4-4-dv10A0A075B651 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav4-4-dv10A0A075B651 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.02□□□□□ -0.01
Trav4-4-dv10A0A075B651 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm7417-201ENSMUST00000192950 473 ntBASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav4-4-dv10A0A075B651 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trav4-4-dv10A0A075B651 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.98□□□□□ -0.01
Trav4-4-dv10A0A075B651 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 173 ms