Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav12-3A0A075B648 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav12-3A0A075B648 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Trav12-3A0A075B648 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav12-3A0A075B648 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav12-3A0A075B648 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav12-3A0A075B648 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.05□□□□□ -0.16
Trav12-3A0A075B648 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav12-3A0A075B648 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms