Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav8-1A0A075B641 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8-1A0A075B641 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8-1A0A075B641 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8-1A0A075B641 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav8-1A0A075B641 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8-1A0A075B641 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.82□□□□□ -0.2
Trav8-1A0A075B641 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8-1A0A075B641 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav8-1A0A075B641 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav8-1A0A075B641 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav8-1A0A075B641 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav8-1A0A075B641 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms