Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-1A0A075B5Z8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-1A0A075B5Z8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-1A0A075B5Z8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-1A0A075B5Z8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav6-1A0A075B5Z8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav6-1A0A075B5Z8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav6-1A0A075B5Z8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm7417-201ENSMUST00000192950 473 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms