Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpxQ9JHS4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpxQ9JHS4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.58■□□□□ 0.41
ClpxQ9JHS4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ClpxQ9JHS4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ClpxQ9JHS4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.58■□□□□ 0.41
ClpxQ9JHS4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
ClpxQ9JHS4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
ClpxQ9JHS4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.58■□□□□ 0.4
ClpxQ9JHS4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpxQ9JHS4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpxQ9JHS4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClpxQ9JHS4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ClpxQ9JHS4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ClpxQ9JHS4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms