Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Upk1aQ9D132 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk1aQ9D132 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk1aQ9D132 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk1aQ9D132 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Upk1aQ9D132 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Upk1aQ9D132 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Upk1aQ9D132 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Upk1aQ9D132 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Upk1aQ9D132 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Upk1aQ9D132 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Upk1aQ9D132 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Upk1aQ9D132 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Upk1aQ9D132 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk1aQ9D132 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.39■□□□□ 0.53
Upk1aQ9D132 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Upk1aQ9D132 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk1aQ9D132 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk1aQ9D132 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Upk1aQ9D132 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.39■□□□□ 0.53
Upk1aQ9D132 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Upk1aQ9D132 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.38■□□□□ 0.53
Upk1aQ9D132 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.38■□□□□ 0.53
Upk1aQ9D132 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk1aQ9D132 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.37■□□□□ 0.53
Upk1aQ9D132 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.37■□□□□ 0.53
Upk1aQ9D132 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk1aQ9D132 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Upk1aQ9D132 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upk1aQ9D132 Gm15820-201ENSMUST00000201566 728 ntBASIC18.36■□□□□ 0.53
Upk1aQ9D132 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Upk1aQ9D132 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.36■□□□□ 0.53
Upk1aQ9D132 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk1aQ9D132 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Upk1aQ9D132 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk1aQ9D132 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.35■□□□□ 0.53
Upk1aQ9D132 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk1aQ9D132 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.34■□□□□ 0.53
Upk1aQ9D132 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.34■□□□□ 0.53
Upk1aQ9D132 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk1aQ9D132 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms