Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1eQ9CZQ6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1eQ9CZQ6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Raet1eQ9CZQ6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Raet1eQ9CZQ6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1eQ9CZQ6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1eQ9CZQ6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1eQ9CZQ6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.02■□□□□ 0.31
Raet1eQ9CZQ6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1eQ9CZQ6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1eQ9CZQ6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1eQ9CZQ6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Raet1eQ9CZQ6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1eQ9CZQ6 Gm5953-201ENSMUST00000220644 2616 ntBASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1eQ9CZQ6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1eQ9CZQ6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1eQ9CZQ6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Raet1eQ9CZQ6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1eQ9CZQ6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms