Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Smurf1Q9CUN6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Smurf1Q9CUN6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Gm15820-201ENSMUST00000201566 728 ntBASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smurf1Q9CUN6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Smurf1Q9CUN6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Smurf1Q9CUN6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.52■□□□□ 0.39
Smurf1Q9CUN6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smurf1Q9CUN6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smurf1Q9CUN6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smurf1Q9CUN6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Smurf1Q9CUN6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smurf1Q9CUN6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
Smurf1Q9CUN6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Grk6-206ENSMUST00000224995 2971 ntBASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Gm10232-201ENSMUST00000089221 720 ntBASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Smurf1Q9CUN6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Gm13238-201ENSMUST00000117655 780 ntBASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Smurf1Q9CUN6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smurf1Q9CUN6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms