Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 FEM1AP4-201ENST00000443167 1987 ntBASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 AC092667.1-201ENST00000434301 2586 ntBASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 AC019171.1-201ENST00000601251 1056 ntBASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDCA4Q9BXL8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 ATP5G2P3-201ENST00000429083 425 ntBASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDCA4Q9BXL8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 AL033527.3-201ENST00000566366 1196 ntBASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 CA15P2-201ENST00000611168 834 ntBASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 AC129492.7-201ENST00000622992 756 ntBASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 AL157384.1-201ENST00000445995 2473 ntBASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 FP325331.1-202ENST00000623531 1380 ntBASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDCA4Q9BXL8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 AC004987.1-201ENST00000428627 508 ntBASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDCA4Q9BXL8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDCA4Q9BXL8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA4Q9BXL8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA4Q9BXL8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDCA4Q9BXL8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 AC120024.1-201ENST00000562672 995 ntBASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 AF106564.1-201ENST00000607058 2553 ntBASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDCA4Q9BXL8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.5■□□□□ 0.71
CDCA4Q9BXL8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms