Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col25a1Q99MQ5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col25a1Q99MQ5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Col25a1Q99MQ5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.16■□□□□ 0.82
Col25a1Q99MQ5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col25a1Q99MQ5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col25a1Q99MQ5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.16■□□□□ 0.82
Col25a1Q99MQ5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col25a1Q99MQ5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Col25a1Q99MQ5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.14■□□□□ 0.81
Col25a1Q99MQ5 Gm43799-201ENSMUST00000201845 579 ntBASIC20.14■□□□□ 0.81
Col25a1Q99MQ5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col25a1Q99MQ5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.13■□□□□ 0.81
Col25a1Q99MQ5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col25a1Q99MQ5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Gm11249-201ENSMUST00000117071 859 ntBASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Gm6433-201ENSMUST00000118634 875 ntBASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col25a1Q99MQ5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col25a1Q99MQ5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Col25a1Q99MQ5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col25a1Q99MQ5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.08■□□□□ 0.81
Col25a1Q99MQ5 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.08■□□□□ 0.81
Col25a1Q99MQ5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col25a1Q99MQ5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col25a1Q99MQ5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col25a1Q99MQ5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col25a1Q99MQ5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Col25a1Q99MQ5 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms