Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb3Q91XZ7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb3Q91XZ7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb3Q91XZ7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb3Q91XZ7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb3Q91XZ7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhb3Q91XZ7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb3Q91XZ7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.27■□□□□ 0.67
Pcdhb3Q91XZ7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Pcdhb3Q91XZ7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb3Q91XZ7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb3Q91XZ7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb3Q91XZ7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb3Q91XZ7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb3Q91XZ7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Pcdhb3Q91XZ7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb3Q91XZ7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.21■□□□□ 0.67
Pcdhb3Q91XZ7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcdhb3Q91XZ7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb3Q91XZ7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms