Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm1Q8VC85 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm1Q8VC85 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.54■□□□□ 0.56
Lsm1Q8VC85 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm1Q8VC85 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Serp2-204ENSMUST00000228055 705 ntBASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm1Q8VC85 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm1Q8VC85 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lsm1Q8VC85 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lsm1Q8VC85 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Lsm1Q8VC85 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm1Q8VC85 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm1Q8VC85 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.48■□□□□ 0.55
Lsm1Q8VC85 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lsm1Q8VC85 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms