Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS4Y2Q8TD47 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y2Q8TD47 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y2Q8TD47 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y2Q8TD47 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.1■□□□□ 0.65
RPS4Y2Q8TD47 AC004687.1-201ENST00000579003 1625 ntBASIC19.1■□□□□ 0.65
RPS4Y2Q8TD47 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS4Y2Q8TD47 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 AC021242.3-201ENST00000607598 1377 ntBASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS4Y2Q8TD47 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y2Q8TD47 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y2Q8TD47 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y2Q8TD47 AC005229.4-201ENST00000610085 2198 ntBASIC19.08■□□□□ 0.65
RPS4Y2Q8TD47 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y2Q8TD47 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS4Y2Q8TD47 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
RPS4Y2Q8TD47 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 AL031848.2-201ENST00000607670 837 ntBASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 AC009102.2-201ENST00000606772 1639 ntBASIC19.07■□□□□ 0.64
RPS4Y2Q8TD47 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.06■□□□□ 0.64
RPS4Y2Q8TD47 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RPS4Y2Q8TD47 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4Y2Q8TD47 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS4Y2Q8TD47 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms