Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Ptcd2Q8R3K3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptcd2Q8R3K3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Ptcd2Q8R3K3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.64■□□□□ 0.89
Ptcd2Q8R3K3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd2Q8R3K3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptcd2Q8R3K3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ptcd2Q8R3K3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.64■□□□□ 0.89
Ptcd2Q8R3K3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptcd2Q8R3K3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptcd2Q8R3K3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ptcd2Q8R3K3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ptcd2Q8R3K3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptcd2Q8R3K3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Mir5122-201ENSMUST00000175004 89 ntBASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ptcd2Q8R3K3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd2Q8R3K3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.58■□□□□ 0.88
Ptcd2Q8R3K3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd2Q8R3K3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd2Q8R3K3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptcd2Q8R3K3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd2Q8R3K3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd2Q8R3K3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ptcd2Q8R3K3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd2Q8R3K3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptcd2Q8R3K3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ptcd2Q8R3K3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms