Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nudcd3Q8R1N4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nudcd3Q8R1N4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd3Q8R1N4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Gm9870-201ENSMUST00000063874 645 ntBASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd3Q8R1N4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nudcd3Q8R1N4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nudcd3Q8R1N4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nudcd3Q8R1N4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nudcd3Q8R1N4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nudcd3Q8R1N4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nudcd3Q8R1N4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nudcd3Q8R1N4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 AA386476-201ENSMUST00000098781 1665 ntBASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Nudcd3Q8R1N4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms