Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Depdc1aQ8CIG0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Gm7514-201ENSMUST00000209475 934 ntBASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Depdc1aQ8CIG0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Depdc1aQ8CIG0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Depdc1aQ8CIG0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Depdc1aQ8CIG0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Depdc1aQ8CIG0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.95■■□□□ 1.1
Depdc1aQ8CIG0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.95■■□□□ 1.1
Depdc1aQ8CIG0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Depdc1aQ8CIG0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Gm7860-201ENSMUST00000121190 879 ntBASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Depdc1aQ8CIG0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Depdc1aQ8CIG0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
Depdc1aQ8CIG0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Depdc1aQ8CIG0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Depdc1aQ8CIG0 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Gm13534-201ENSMUST00000121169 513 ntBASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
Depdc1aQ8CIG0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1aQ8CIG0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Depdc1aQ8CIG0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.87■■□□□ 1.09
Depdc1aQ8CIG0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1aQ8CIG0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1aQ8CIG0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Depdc1aQ8CIG0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms