Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Serp2-204ENSMUST00000228055 705 ntBASIC19.42■□□□□ 0.7
Clip4Q8CI96 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Clip4Q8CI96 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clip4Q8CI96 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.4■□□□□ 0.7
Clip4Q8CI96 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Clip4Q8CI96 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clip4Q8CI96 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip4Q8CI96 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Clip4Q8CI96 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.7
Clip4Q8CI96 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Gm8493-201ENSMUST00000196881 489 ntBASIC19.39■□□□□ 0.69
Clip4Q8CI96 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.39■□□□□ 0.69
Clip4Q8CI96 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Clip4Q8CI96 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Clip4Q8CI96 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.37■□□□□ 0.69
Clip4Q8CI96 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Gm12251-201ENSMUST00000117893 792 ntBASIC19.37■□□□□ 0.69
Clip4Q8CI96 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Mir6236-201ENSMUST00000184437 123 ntBASIC19.37■□□□□ 0.69
Clip4Q8CI96 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clip4Q8CI96 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.36■□□□□ 0.69
Clip4Q8CI96 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clip4Q8CI96 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Spcs1-204ENSMUST00000226782 949 ntBASIC19.35■□□□□ 0.69
Clip4Q8CI96 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clip4Q8CI96 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms