Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Calcoco1Q8CGU1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Calcoco1Q8CGU1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Calcoco1Q8CGU1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Calcoco1Q8CGU1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Grk6-206ENSMUST00000224995 2971 ntBASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Calcoco1Q8CGU1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Calcoco1Q8CGU1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Calcoco1Q8CGU1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Calcoco1Q8CGU1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Calcoco1Q8CGU1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Calcoco1Q8CGU1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.01■□□□□ 0.79
Calcoco1Q8CGU1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Calcoco1Q8CGU1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms