Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rp1l1Q8CGM2 Gm6576-201ENSMUST00000169678 883 ntBASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rp1l1Q8CGM2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rp1l1Q8CGM2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Gm37055-201ENSMUST00000191866 133 ntBASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rp1l1Q8CGM2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rp1l1Q8CGM2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rp1l1Q8CGM2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rp1l1Q8CGM2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rp1l1Q8CGM2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rp1l1Q8CGM2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rp1l1Q8CGM2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rp1l1Q8CGM2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rp1l1Q8CGM2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.42■□□□□ 0.86
Rp1l1Q8CGM2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.42■□□□□ 0.86
Rp1l1Q8CGM2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rp1l1Q8CGM2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rp1l1Q8CGM2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rp1l1Q8CGM2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rp1l1Q8CGM2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rp1l1Q8CGM2 Gm2559-201ENSMUST00000201323 363 ntBASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms