Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.41■□□□□ 0.86
Ccdc28aQ8CEI3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc28aQ8CEI3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.41■□□□□ 0.86
Ccdc28aQ8CEI3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc28aQ8CEI3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc28aQ8CEI3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc28aQ8CEI3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc28aQ8CEI3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc28aQ8CEI3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc28aQ8CEI3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Ccdc28aQ8CEI3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc28aQ8CEI3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc28aQ8CEI3 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc28aQ8CEI3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc28aQ8CEI3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc28aQ8CEI3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc28aQ8CEI3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc28aQ8CEI3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc28aQ8CEI3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc28aQ8CEI3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.33■□□□□ 0.85
Ccdc28aQ8CEI3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc28aQ8CEI3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.33■□□□□ 0.85
Ccdc28aQ8CEI3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms