Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ppp1r3eQ8BRJ4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ppp1r3eQ8BRJ4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ppp1r3eQ8BRJ4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ppp1r3eQ8BRJ4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ppp1r3eQ8BRJ4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ppp1r3eQ8BRJ4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Ppp1r3eQ8BRJ4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Serp2-204ENSMUST00000228055 705 ntBASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ppp1r3eQ8BRJ4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ppp1r3eQ8BRJ4 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms