Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smco3Q8BQM7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smco3Q8BQM7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.95■□□□□ 0.14
Smco3Q8BQM7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smco3Q8BQM7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smco3Q8BQM7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smco3Q8BQM7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Smco3Q8BQM7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Gm10420-201ENSMUST00000121713 882 ntBASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Smco3Q8BQM7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Smco3Q8BQM7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Smco3Q8BQM7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Smco3Q8BQM7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Smco3Q8BQM7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms