Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf18Q8BM39 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf18Q8BM39 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf18Q8BM39 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf18Q8BM39 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf18Q8BM39 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Prpf18Q8BM39 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf18Q8BM39 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf18Q8BM39 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf18Q8BM39 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf18Q8BM39 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Gm7143-201ENSMUST00000222811 859 ntBASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prpf18Q8BM39 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf18Q8BM39 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.28■□□□□ 0.52
Prpf18Q8BM39 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms